WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0280.12a.1 Sequence Name  B0280.12a.1
Length (nt)  2849   Chromosome Location  III: 7138643-7144914
Chromosome . Primary Identifier  III Chromosome Location . Start  7138643
Chromosome Location . End  7144914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001613 glr-2 B0280.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0280.12a B0280.12a 2727   III: 7138683-7139064

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0280.12a.1 7138643 7144914 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94502   422   III: 7138643-7139064 Caenorhabditis elegans
Exon94503   201   III: 7139157-7139357 Caenorhabditis elegans
Exon94505   95   III: 7139752-7139846 Caenorhabditis elegans
Exon94507   101   III: 7139894-7139994 Caenorhabditis elegans
Exon94509   98   III: 7140039-7140136 Caenorhabditis elegans
Exon94511   161   III: 7140183-7140343 Caenorhabditis elegans
Exon94514   195   III: 7140811-7141005 Caenorhabditis elegans
Exon94516   151   III: 7141070-7141220 Caenorhabditis elegans
Exon94519   209   III: 7141516-7141724 Caenorhabditis elegans
Exon94522   268   III: 7141768-7142035 Caenorhabditis elegans
Exon94526   156   III: 7142603-7142758 Caenorhabditis elegans
Exon94531   113   III: 7143232-7143344 Caenorhabditis elegans
Exon94533   80   III: 7143394-7143473 Caenorhabditis elegans
Exon94535   166   III: 7143517-7143682 Caenorhabditis elegans
Exon94538   95   III: 7143897-7143991 Caenorhabditis elegans
Exon94540   124   III: 7144042-7144165 Caenorhabditis elegans
Exon94542   56   III: 7144258-7144313 Caenorhabditis elegans
Exon94544   158   III: 7144757-7144914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0280.12a.1 7138643 7144914 -1

1 Sequence

Length
2849

1 Sequence Ontology Term

Identifier Name Description
transcript