WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20H4.1a.1 Sequence Name  T20H4.1a.1
Length (nt)  1658   Chromosome Location  III: 7243280-7245743
Chromosome . Primary Identifier  III Chromosome Location . Start  7243280
Chromosome Location . End  7245743 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20H4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003890 osm-10 T20H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20H4.1a T20H4.1a 1260   III: 7243363-7243395

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20H4.1a.1 7243280 7245743 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94840   116   III: 7243280-7243395 Caenorhabditis elegans
Exon94843   436   III: 7243502-7243937 Caenorhabditis elegans
Exon94845   68   III: 7243991-7244058 Caenorhabditis elegans
Exon94847   150   III: 7244518-7244667 Caenorhabditis elegans
Exon94849   411   III: 7244728-7245138 Caenorhabditis elegans
Exon94851   477   III: 7245267-7245743 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20H4.1a.1 7243280 7245743 1

1 Sequence

Length
1658

1 Sequence Ontology Term

Identifier Name Description
transcript