WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20H4.1b.1 Sequence Name  T20H4.1b.1
Length (nt)  1542   Chromosome Location  III: 7243318-7245746
Chromosome . Primary Identifier  III Chromosome Location . Start  7243318
Chromosome Location . End  7245746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20H4.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003890 osm-10 T20H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20H4.1b T20H4.1b 1179   III: 7243363-7243395

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20H4.1b.1 7243318 7245746 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94841   78   III: 7243318-7243395 Caenorhabditis elegans
Exon94842   253   III: 7243502-7243754 Caenorhabditis elegans
Exon94844   102   III: 7243836-7243937 Caenorhabditis elegans
Exon94846   68   III: 7243991-7244058 Caenorhabditis elegans
Exon94848   150   III: 7244518-7244667 Caenorhabditis elegans
Exon94850   411   III: 7244728-7245138 Caenorhabditis elegans
Exon94852   480   III: 7245267-7245746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20H4.1b.1 7243318 7245746 1

1 Sequence

Length
1542

1 Sequence Ontology Term

Identifier Name Description
transcript