WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F8.2.1 Sequence Name  F08F8.2.1
Length (nt)  1945   Chromosome Location  III: 7359498-7362129
Chromosome . Primary Identifier  III Chromosome Location . Start  7359498
Chromosome Location . End  7362129 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017268 hmgr-1 F08F8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F8.2 F08F8.2 1653   III: 7359515-7359594

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.2.1 7359498 7362129 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95171   97   III: 7359498-7359594 Caenorhabditis elegans
Exon95172   206   III: 7359687-7359892 Caenorhabditis elegans
Exon95173   167   III: 7359941-7360107 Caenorhabditis elegans
Exon95174   248   III: 7360162-7360409 Caenorhabditis elegans
Exon95175   177   III: 7360690-7360866 Caenorhabditis elegans
Exon95176   621   III: 7361033-7361653 Caenorhabditis elegans
Exon95177   429   III: 7361701-7362129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.2.1 7359498 7362129 1

1 Sequence

Length
1945

1 Sequence Ontology Term

Identifier Name Description
transcript