WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08F8.2 Sequence Name  F08F8.2
Length (nt)  1653   Chromosome Location  III: 7359515-7359594
Chromosome . Primary Identifier  III Chromosome Location . Start  7359515
Chromosome Location . End  7359594
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30649 HMGR-1 60.1 550 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00067471
WBRNAi00067700
WBRNAi00008614
WBRNAi00025034
WBRNAi00085409
WBRNAi00001267
WBRNAi00090843
WBRNAi00082108
WBRNAi00071308
WBRNAi00076277
WBRNAi00002473
WBRNAi00002727
WBRNAi00044027
WBRNAi00111925
WBRNAi00082063
WBRNAi00082062
WBRNAi00082073
WBRNAi00116422
WBRNAi00044026
WBRNAi00023185
WBRNAi00023697
WBRNAi00082061
WBRNAi00082068
WBRNAi00023404
WBRNAi00082075
WBRNAi00082074
WBRNAi00082076
WBRNAi00023985

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08F8.2 7359515 7359594 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017268 hmgr-1 F08F8.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08F8.2 7359515 7359594 1
CDS:F08F8.2 7359687 7359892 1
CDS:F08F8.2 7359941 7360107 1
CDS:F08F8.2 7360162 7360409 1
CDS:F08F8.2 7360690 7360866 1
CDS:F08F8.2 7361033 7361653 1
CDS:F08F8.2 7361701 7361854 1

1 Sequence

Length
1653

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08F8.2.1 F08F8.2.1 1945   III: 7359498-7362129