WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK688.5c.4 Sequence Name  ZK688.5c.4
Length (nt)  5286   Chromosome Location  III: 7885090-7891600
Chromosome . Primary Identifier  III Chromosome Location . Start  7885090
Chromosome Location . End  7891600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK688.5c.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022800 ZK688.5 ZK688.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK688.5c ZK688.5c 522   III: 7890845-7890873

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK688.5c.4 7885090 7891600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96275   513   III: 7885090-7885602 Caenorhabditis elegans
Exon96281   171   III: 7885798-7885968 Caenorhabditis elegans
Exon96288   234   III: 7886030-7886263 Caenorhabditis elegans
Exon96297   693   III: 7886424-7887116 Caenorhabditis elegans
Exon96305   193   III: 7887162-7887354 Caenorhabditis elegans
Exon96313   2369   III: 7887779-7890147 Caenorhabditis elegans
Exon96321   263   III: 7890194-7890456 Caenorhabditis elegans
Exon96331   317   III: 7890557-7890873 Caenorhabditis elegans
Exon96342   206   III: 7890921-7891126 Caenorhabditis elegans
Exon96348   167   III: 7891226-7891392 Caenorhabditis elegans
Exon96351   160   III: 7891441-7891600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK688.5c.4 7885090 7891600 -1

1 Sequence

Length
5286

1 Sequence Ontology Term

Identifier Name Description
transcript