WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK688.5c Sequence Name  ZK688.5c
Length (nt)  522   Chromosome Location  III: 7890845-7890873
Chromosome . Primary Identifier  III Chromosome Location . Start  7890845
Chromosome Location . End  7890873
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK688.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48132 ZK688.5, isoform c 18.5 173 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00082835

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK688.5c 7890845 7890873 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022800 ZK688.5 ZK688.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK688.5c 7890845 7890873 -1
CDS:ZK688.5c 7890921 7891126 -1
CDS:ZK688.5c 7891226 7891392 -1
CDS:ZK688.5c 7891441 7891560 -1

1 Sequence

Length
522

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK688.5c.2 ZK688.5c.2 5263   III: 7885084-7891616
Transcript:ZK688.5c.3 ZK688.5c.3 5300   III: 7885085-7891616
Transcript:ZK688.5c.1 ZK688.5c.1 5261   III: 7885085-7891621
Transcript:ZK688.5c.4 ZK688.5c.4 5286   III: 7885090-7891600