WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C29E4.5a Sequence Name  C29E4.5a
Length (nt)  1881   Chromosome Location  III: 7918278-7918499
Chromosome . Primary Identifier  III Chromosome Location . Start  7918278
Chromosome Location . End  7918499
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43801 TAG-250, isoform a 68.9 626 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00041451
WBRNAi00011325
WBRNAi00113516
WBRNAi00005417
WBRNAi00029311

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C29E4.5a 7918278 7918499 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016203 tag-250 C29E4.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C29E4.5a 7918278 7918499 -1
CDS:C29E4.5a 7918546 7918769 -1
CDS:C29E4.5a 7919267 7919331 -1
CDS:C29E4.5a 7919387 7919577 -1
CDS:C29E4.5a 7919626 7919826 -1
CDS:C29E4.5a 7919876 7920003 -1
CDS:C29E4.5a 7921097 7921280 -1
CDS:C29E4.5a 7921590 7921778 -1
CDS:C29E4.5a 7921829 7921917 -1
CDS:C29E4.5a 7923202 7923289 -1
CDS:C29E4.5a 7923576 7923657 -1
CDS:C29E4.5a 7923921 7924044 -1
CDS:C29E4.5a 7924822 7924915 -1

1 Sequence

Length
1881

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C29E4.5a.1 C29E4.5a.1 2178   III: 7917987-7924921