WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54H12.1c.3 Sequence Name  F54H12.1c.3
Length (nt)  2133   Chromosome Location  III: 7974605-7976958
Chromosome . Primary Identifier  III Chromosome Location . Start  7974605
Chromosome Location . End  7976958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54H12.1c.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000041 aco-2 F54H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54H12.1c F54H12.1c 2052   III: 7974706-7974846

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54H12.1c.3 7974605 7976958 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96656   12   III: 7974605-7974616 Caenorhabditis elegans
Exon96657   210   III: 7974637-7974846 Caenorhabditis elegans
Exon96661   1123   III: 7974916-7976038 Caenorhabditis elegans
Exon96665   522   III: 7976098-7976619 Caenorhabditis elegans
Exon96666   266   III: 7976693-7976958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54H12.1c.3 7974605 7976958 1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
transcript