WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54H12.1c Sequence Name  F54H12.1c
Length (nt)  2052   Chromosome Location  III: 7974706-7974846
Chromosome . Primary Identifier  III Chromosome Location . Start  7974706
Chromosome Location . End  7974846
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54H12.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32436 ACO-2, isoform c 73.2 683 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00008862
WBRNAi00025642
WBRNAi00085410
WBRNAi00105961
WBRNAi00064223
WBRNAi00111108
WBRNAi00065270
WBRNAi00084416
WBRNAi00048394
WBRNAi00084412
WBRNAi00069336
WBRNAi00069337

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54H12.1c 7974706 7974846 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000041 aco-2 F54H12.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54H12.1c 7974706 7974846 1
CDS:F54H12.1c 7974916 7976038 1
CDS:F54H12.1c 7976098 7976619 1
CDS:F54H12.1c 7976693 7976958 1

1 Sequence

Length
2052

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54H12.1c.1 F54H12.1c.1 2533   III: 7973841-7977229
Transcript:F54H12.1c.2 F54H12.1c.2 2599   III: 7974431-7977230
Transcript:F54H12.1c.3 F54H12.1c.3 2133   III: 7974605-7976958