WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06H7.3.1 Sequence Name  K06H7.3.1
Length (nt)  1990   Chromosome Location  III: 8088535-8091601
Chromosome . Primary Identifier  III Chromosome Location . Start  8088535
Chromosome Location . End  8091601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06H7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019457 vms-1 K06H7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06H7.3 K06H7.3 1857   III: 8088540-8088684

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06H7.3.1 8088535 8091601 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96985   150   III: 8088535-8088684 Caenorhabditis elegans
Exon96986   112   III: 8088734-8088845 Caenorhabditis elegans
Exon96987   80   III: 8088889-8088968 Caenorhabditis elegans
Exon96988   121   III: 8089015-8089135 Caenorhabditis elegans
Exon96989   114   III: 8089528-8089641 Caenorhabditis elegans
Exon96990   126   III: 8089690-8089815 Caenorhabditis elegans
Exon96991   493   III: 8089866-8090358 Caenorhabditis elegans
Exon96992   174   III: 8090561-8090734 Caenorhabditis elegans
Exon96993   240   III: 8090794-8091033 Caenorhabditis elegans
Exon96994   153   III: 8091081-8091233 Caenorhabditis elegans
Exon96995   227   III: 8091375-8091601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06H7.3.1 8088535 8091601 1

1 Sequence

Length
1990

1 Sequence Ontology Term

Identifier Name Description
transcript