WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K06H7.3 Sequence Name  K06H7.3
Length (nt)  1857   Chromosome Location  III: 8088540-8088684
Chromosome . Primary Identifier  III Chromosome Location . Start  8088540
Chromosome Location . End  8088684
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06H7.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26941 VMS-1 71.3 618 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00113302
WBRNAi00050071
WBRNAi00016685
WBRNAi00076546
WBRNAi00113073

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K06H7.3 8088540 8088684 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019457 vms-1 K06H7.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:K06H7.3 8088540 8088684 1
CDS:K06H7.3 8088734 8088845 1
CDS:K06H7.3 8088889 8088968 1
CDS:K06H7.3 8089015 8089135 1
CDS:K06H7.3 8089528 8089641 1
CDS:K06H7.3 8089690 8089815 1
CDS:K06H7.3 8089866 8090358 1
CDS:K06H7.3 8090561 8090734 1
CDS:K06H7.3 8090794 8091033 1
CDS:K06H7.3 8091081 8091233 1
CDS:K06H7.3 8091375 8091473 1

1 Sequence

Length
1857

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K06H7.3.1 K06H7.3.1 1990   III: 8088535-8091601