WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50C3.2 Sequence Name  C50C3.2
Length (nt)  6711   Chromosome Location  III: 8181933-8181977
Chromosome . Primary Identifier  III Chromosome Location . Start  8181933
Chromosome Location . End  8181977
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50C3.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47978 SPC-2 261.0 2236 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00000300
WBRNAi00042872
WBRNAi00012197
WBRNAi00066630

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C50C3.2 8181933 8181977 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016800 spc-2 C50C3.2 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C50C3.2 8181933 8181977 1
CDS:C50C3.2 8182032 8182135 1
CDS:C50C3.2 8182186 8182399 1
CDS:C50C3.2 8182450 8183289 1
CDS:C50C3.2 8183334 8184107 1
CDS:C50C3.2 8184156 8184569 1
CDS:C50C3.2 8184612 8184918 1
CDS:C50C3.2 8184966 8185854 1
CDS:C50C3.2 8185904 8187043 1
CDS:C50C3.2 8187091 8187385 1
CDS:C50C3.2 8187432 8188046 1
CDS:C50C3.2 8188091 8188807 1
CDS:C50C3.2 8188861 8188976 1
CDS:C50C3.2 8189024 8189150 1
CDS:C50C3.2 8189200 8189313 1

1 Sequence

Length
6711

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50C3.2.1 C50C3.2.1 6822   III: 8181881-8189372