WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05D3.11 Sequence Name  R05D3.11
Length (nt)  3915   Chromosome Location  III: 8375300-8375395
Chromosome . Primary Identifier  III Chromosome Location . Start  8375300
Chromosome Location . End  8375395
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D3.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47959 MET-2 148.1 1304 Caenorhabditis elegans
 

Other

41 RNAi

WormBase ID
WBRNAi00089659
WBRNAi00089662
WBRNAi00089661
WBRNAi00089667
WBRNAi00089581
WBRNAi00098303
WBRNAi00098305
WBRNAi00089666
WBRNAi00051275
WBRNAi00034600
WBRNAi00001234
WBRNAi00082677
WBRNAi00007695
WBRNAi00017428
WBRNAi00005583
WBRNAi00069944
WBRNAi00069968
WBRNAi00086407
WBRNAi00069960
WBRNAi00069980
WBRNAi00070024
WBRNAi00086406
WBRNAi00082635
WBRNAi00091485
WBRNAi00098308
WBRNAi00098307
WBRNAi00098309
WBRNAi00089622
WBRNAi00089646
WBRNAi00089647

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05D3.11 8375300 8375395 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019883 met-2 R05D3.11 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05D3.11 8375300 8375395 1
CDS:R05D3.11 8375465 8375752 1
CDS:R05D3.11 8375800 8376464 1
CDS:R05D3.11 8376533 8377029 1
CDS:R05D3.11 8377533 8378146 1
CDS:R05D3.11 8378447 8379315 1
CDS:R05D3.11 8379367 8379502 1
CDS:R05D3.11 8379551 8380077 1
CDS:R05D3.11 8380410 8380632 1

1 Sequence

Length
3915

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05D3.11.1 R05D3.11.1 4131   III: 8375300-8380848