WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK370.3b.2 Sequence Name  ZK370.3b.2
Length (nt)  3154   Chromosome Location  III: 8720202-8725332
Chromosome . Primary Identifier  III Chromosome Location . Start  8720202
Chromosome Location . End  8725332 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK370.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022717 hipr-1 ZK370.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK370.3b ZK370.3b 2766   III: 8720204-8720475

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK370.3b.2 8720202 8725332 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98593   274   III: 8720202-8720475 Caenorhabditis elegans
Exon98597   257   III: 8720524-8720780 Caenorhabditis elegans
Exon98600   524   III: 8720841-8721364 Caenorhabditis elegans
Exon98603   112   III: 8721449-8721560 Caenorhabditis elegans
Exon98606   362   III: 8721642-8722003 Caenorhabditis elegans
Exon98609   97   III: 8722623-8722719 Caenorhabditis elegans
Exon98612   84   III: 8722769-8722852 Caenorhabditis elegans
Exon98615   790   III: 8723309-8724098 Caenorhabditis elegans
Exon98618   262   III: 8724483-8724744 Caenorhabditis elegans
Exon98619   47   III: 8724801-8724847 Caenorhabditis elegans
Exon98622   345   III: 8724988-8725332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK370.3b.2 8720202 8725332 1

1 Sequence

Length
3154

1 Sequence Ontology Term

Identifier Name Description
transcript