WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK370.3b Sequence Name  ZK370.3b
Length (nt)  2766   Chromosome Location  III: 8720204-8720475
Chromosome . Primary Identifier  III Chromosome Location . Start  8720204
Chromosome Location . End  8720475
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK370.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29640 HIPR-1, isoform b 103.7 921 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00002409
WBRNAi00059376
WBRNAi00022519
WBRNAi00090903
WBRNAi00005228
WBRNAi00069113
WBRNAi00069114
WBRNAi00069115
WBRNAi00088625
WBRNAi00088732
WBRNAi00065638
WBRNAi00098497

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK370.3b 8720204 8720475 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022717 hipr-1 ZK370.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK370.3b 8720204 8720475 1
CDS:ZK370.3b 8720524 8720780 1
CDS:ZK370.3b 8720841 8721364 1
CDS:ZK370.3b 8721449 8721560 1
CDS:ZK370.3b 8721642 8722003 1
CDS:ZK370.3b 8722623 8722719 1
CDS:ZK370.3b 8722769 8722852 1
CDS:ZK370.3b 8723309 8724098 1
CDS:ZK370.3b 8724483 8724744 1
CDS:ZK370.3b 8724801 8724806 1

1 Sequence

Length
2766

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK370.3b.2 ZK370.3b.2 3154   III: 8720202-8725332
Transcript:ZK370.3b.1 ZK370.3b.1 3295   III: 8720202-8725333