WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK370.3b.1 Sequence Name  ZK370.3b.1
Length (nt)  3295   Chromosome Location  III: 8720202-8725333
Chromosome . Primary Identifier  III Chromosome Location . Start  8720202
Chromosome Location . End  8725333 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK370.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022717 hipr-1 ZK370.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK370.3b ZK370.3b 2766   III: 8720204-8720475

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK370.3b.1 8720202 8725333 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon98594   274   III: 8720202-8720475 Caenorhabditis elegans
Exon98596   257   III: 8720524-8720780 Caenorhabditis elegans
Exon98599   524   III: 8720841-8721364 Caenorhabditis elegans
Exon98602   112   III: 8721449-8721560 Caenorhabditis elegans
Exon98605   362   III: 8721642-8722003 Caenorhabditis elegans
Exon98608   97   III: 8722623-8722719 Caenorhabditis elegans
Exon98611   84   III: 8722769-8722852 Caenorhabditis elegans
Exon98614   790   III: 8723309-8724098 Caenorhabditis elegans
Exon98617   262   III: 8724483-8724744 Caenorhabditis elegans
Exon98620   533   III: 8724801-8725333 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK370.3b.1 8720202 8725333 1

1 Sequence

Length
3295

1 Sequence Ontology Term

Identifier Name Description
transcript