WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54G8.5 Sequence Name  F54G8.5
Length (nt)  2535   Chromosome Location  III: 9157243-9157515
Chromosome . Primary Identifier  III Chromosome Location . Start  9157243
Chromosome Location . End  9157515
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37974 PTR-9 96.0 844 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00048387
WBRNAi00048393
WBRNAi00076949
WBRNAi00076917
WBRNAi00015667
WBRNAi00015670
WBRNAi00006171
WBRNAi00006320

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54G8.5 9157243 9157515 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004223 ptr-9 F54G8.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54G8.5 9157243 9157515 -1
CDS:F54G8.5 9157564 9157764 -1
CDS:F54G8.5 9157929 9158316 -1
CDS:F54G8.5 9158366 9158711 -1
CDS:F54G8.5 9158756 9158902 -1
CDS:F54G8.5 9159310 9159489 -1
CDS:F54G8.5 9159536 9159858 -1
CDS:F54G8.5 9160087 9160175 -1
CDS:F54G8.5 9160234 9160335 -1
CDS:F54G8.5 9160380 9160481 -1
CDS:F54G8.5 9160528 9160793 -1
CDS:F54G8.5 9161455 9161527 -1
CDS:F54G8.5 9161589 9161633 -1

1 Sequence

Length
2535

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54G8.5.1 F54G8.5.1 2594   III: 9157204-9161653