WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54G8.3 Sequence Name  F54G8.3
Length (nt)  3420   Chromosome Location  III: 9168361-9168548
Chromosome . Primary Identifier  III Chromosome Location . Start  9168361
Chromosome Location . End  9168548
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G8.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00205 INA-1 127.7 1139 Caenorhabditis elegans
 

Other

53 RNAi

WormBase ID
WBRNAi00089829
WBRNAi00048389
WBRNAi00048390
WBRNAi00025641
WBRNAi00083946
WBRNAi00032823
WBRNAi00071703
WBRNAi00006991
WBRNAi00097218
WBRNAi00097358
WBRNAi00097373
WBRNAi00071344
WBRNAi00008861
WBRNAi00075648
WBRNAi00065727
WBRNAi00075649
WBRNAi00092228
WBRNAi00097800
WBRNAi00097814
WBRNAi00097794
WBRNAi00097797
WBRNAi00097799
WBRNAi00097798
WBRNAi00090424
WBRNAi00097801
WBRNAi00097803
WBRNAi00097802
WBRNAi00097805
WBRNAi00097804
WBRNAi00097807

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54G8.3 9168361 9168548 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002081 ina-1 F54G8.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54G8.3 9168361 9168548 -1
CDS:F54G8.3 9168697 9168955 -1
CDS:F54G8.3 9169011 9169932 -1
CDS:F54G8.3 9170076 9170258 -1
CDS:F54G8.3 9170373 9171634 -1
CDS:F54G8.3 9171757 9171942 -1
CDS:F54G8.3 9172052 9172205 -1
CDS:F54G8.3 9172273 9172383 -1
CDS:F54G8.3 9172583 9172737 -1

1 Sequence

Length
3420

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54G8.3.1 F54G8.3.1 3773   III: 9168073-9172802