WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G5.5.1 Sequence Name  T23G5.5.1
Length (nt)  2074   Chromosome Location  III: 9242975-9246802
Chromosome . Primary Identifier  III Chromosome Location . Start  9242975
Chromosome Location . End  9246802 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000934 dat-1 T23G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G5.5 T23G5.5 1848   III: 9242975-9242993

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.5.1 9242975 9246802 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon99980   19   III: 9242975-9242993 Caenorhabditis elegans
Exon99981   119   III: 9243370-9243488 Caenorhabditis elegans
Exon99982   320   III: 9243537-9243856 Caenorhabditis elegans
Exon99983   150   III: 9244172-9244321 Caenorhabditis elegans
Exon99984   94   III: 9244373-9244466 Caenorhabditis elegans
Exon99985   195   III: 9244516-9244710 Caenorhabditis elegans
Exon99986   113   III: 9244755-9244867 Caenorhabditis elegans
Exon99987   238   III: 9244915-9245152 Caenorhabditis elegans
Exon99988   129   III: 9245195-9245323 Caenorhabditis elegans
Exon99989   100   III: 9245368-9245467 Caenorhabditis elegans
Exon99990   101   III: 9245509-9245609 Caenorhabditis elegans
Exon99991   171   III: 9245867-9246037 Caenorhabditis elegans
Exon99992   325   III: 9246478-9246802 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G5.5.1 9242975 9246802 1

1 Sequence

Length
2074

1 Sequence Ontology Term

Identifier Name Description
transcript