WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04H4.1a.1 Sequence Name  K04H4.1a.1
Length (nt)  5611   Chromosome Location  III: 9336881-9344447
Chromosome . Primary Identifier  III Chromosome Location . Start  9336881
Chromosome Location . End  9344447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04H4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001263 emb-9 K04H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04H4.1a K04H4.1a 5280   III: 9337163-9337258

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04H4.1a.1 9336881 9344447 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100173   378   III: 9336881-9337258 Caenorhabditis elegans
Exon100175   782   III: 9337676-9338457 Caenorhabditis elegans
Exon100177   1273   III: 9338516-9339788 Caenorhabditis elegans
Exon100179   861   III: 9339878-9340738 Caenorhabditis elegans
Exon100181   243   III: 9340793-9341035 Caenorhabditis elegans
Exon100182   255   III: 9341129-9341383 Caenorhabditis elegans
Exon100183   855   III: 9341440-9342294 Caenorhabditis elegans
Exon100185   125   III: 9342339-9342463 Caenorhabditis elegans
Exon100187   403   III: 9342521-9342923 Caenorhabditis elegans
Exon100189   152   III: 9343329-9343480 Caenorhabditis elegans
Exon100191   167   III: 9343890-9344056 Caenorhabditis elegans
Exon100194   117   III: 9344331-9344447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04H4.1a.1 9336881 9344447 -1

1 Sequence

Length
5611

1 Sequence Ontology Term

Identifier Name Description
transcript