WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1098.10f.1 Sequence Name  ZK1098.10f.1
Length (nt)  2727   Chromosome Location  III: 9548791-9556116
Chromosome . Primary Identifier  III Chromosome Location . Start  9548791
Chromosome Location . End  9556116 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1098.10f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006755 unc-16 ZK1098.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1098.10f ZK1098.10f 2727   III: 9548791-9548821

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10f.1 9548791 9556116 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon100801   31   III: 9548791-9548821 Caenorhabditis elegans
Exon100807   169   III: 9549172-9549340 Caenorhabditis elegans
Exon100820   44   III: 9549414-9549457 Caenorhabditis elegans
Exon100855   254   III: 9550721-9550974 Caenorhabditis elegans
Exon100870   197   III: 9551189-9551385 Caenorhabditis elegans
Exon100885   114   III: 9551439-9551552 Caenorhabditis elegans
Exon100907   331   III: 9552582-9552912 Caenorhabditis elegans
Exon100918   400   III: 9553226-9553625 Caenorhabditis elegans
Exon100928   48   III: 9553676-9553723 Caenorhabditis elegans
Exon100940   148   III: 9554443-9554590 Caenorhabditis elegans
Exon100950   81   III: 9554638-9554718 Caenorhabditis elegans
Exon100960   68   III: 9554769-9554836 Caenorhabditis elegans
Exon100970   149   III: 9555122-9555270 Caenorhabditis elegans
Exon100980   286   III: 9555328-9555613 Caenorhabditis elegans
Exon100990   300   III: 9555664-9555963 Caenorhabditis elegans
Exon100995   107   III: 9556010-9556116 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1098.10f.1 9548791 9556116 1

1 Sequence

Length
2727

1 Sequence Ontology Term

Identifier Name Description
transcript