WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05G5.5d.1 Sequence Name  T05G5.5d.1
Length (nt)  869   Chromosome Location  III: 9749583-9750977
Chromosome . Primary Identifier  III Chromosome Location . Start  9749583
Chromosome Location . End  9750977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011500 T05G5.5 T05G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05G5.5d T05G5.5d 741   III: 9749711-9749895

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05G5.5d.1 9749583 9750977 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101458   313   III: 9749583-9749895 Caenorhabditis elegans
Exon101464   170   III: 9749944-9750113 Caenorhabditis elegans
Exon101467   89   III: 9750336-9750424 Caenorhabditis elegans
Exon101470   128   III: 9750474-9750601 Caenorhabditis elegans
Exon101473   169   III: 9750809-9750977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05G5.5d.1 9749583 9750977 -1

1 Sequence

Length
869

1 Sequence Ontology Term

Identifier Name Description
transcript