WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05G5.5d Sequence Name  T05G5.5d
Length (nt)  741   Chromosome Location  III: 9749711-9749895
Chromosome . Primary Identifier  III Chromosome Location . Start  9749711
Chromosome Location . End  9749895
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.5d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00504 T05G5.5, isoform d 28.2 246 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052564
WBRNAi00006173
WBRNAi00035228

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05G5.5d 9749711 9749895 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011500 T05G5.5 T05G5.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05G5.5d 9749711 9749895 -1
CDS:T05G5.5d 9749944 9750113 -1
CDS:T05G5.5d 9750336 9750424 -1
CDS:T05G5.5d 9750474 9750601 -1
CDS:T05G5.5d 9750809 9750977 -1

1 Sequence

Length
741

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05G5.5d.1 T05G5.5d.1 869   III: 9749583-9750977