WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05G5.6.1 Sequence Name  T05G5.6.1
Length (nt)  1016   Chromosome Location  III: 9751552-9752883
Chromosome . Primary Identifier  III Chromosome Location . Start  9751552
Chromosome Location . End  9752883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001155 ech-6 T05G5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05G5.6 T05G5.6 867   III: 9751693-9751746

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05G5.6.1 9751552 9752883 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101475   195   III: 9751552-9751746 Caenorhabditis elegans
Exon101476   299   III: 9751969-9752267 Caenorhabditis elegans
Exon101477   211   III: 9752316-9752526 Caenorhabditis elegans
Exon101478   311   III: 9752573-9752883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05G5.6.1 9751552 9752883 -1

1 Sequence

Length
1016

1 Sequence Ontology Term

Identifier Name Description
transcript