WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05G5.6 Sequence Name  T05G5.6
Length (nt)  867   Chromosome Location  III: 9751693-9751746
Chromosome . Primary Identifier  III Chromosome Location . Start  9751693
Chromosome Location . End  9751746
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05G5.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00318 ECH-6 31.2 288 Caenorhabditis elegans
 

Other

26 RNAi

WormBase ID
WBRNAi00052565
WBRNAi00088196
WBRNAi00088319
WBRNAi00105949
WBRNAi00106023
WBRNAi00106077
WBRNAi00106131
WBRNAi00006050
WBRNAi00035229
WBRNAi00114363
WBRNAi00026202
WBRNAi00109997
WBRNAi00009122
WBRNAi00102617
WBRNAi00088063
WBRNAi00088104
WBRNAi00088155
WBRNAi00088237
WBRNAi00088278
WBRNAi00088360
WBRNAi00088401
WBRNAi00106960
WBRNAi00109130
WBRNAi00109900
WBRNAi00109933
WBRNAi00109966

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05G5.6 9751693 9751746 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001155 ech-6 T05G5.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05G5.6 9751693 9751746 -1
CDS:T05G5.6 9751969 9752267 -1
CDS:T05G5.6 9752316 9752526 -1
CDS:T05G5.6 9752573 9752875 -1

1 Sequence

Length
867

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05G5.6.1 T05G5.6.1 1016   III: 9751552-9752883