WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E11.1a.2 Sequence Name  R10E11.1a.2
Length (nt)  6664   Chromosome Location  III: 9766509-9774807
Chromosome . Primary Identifier  III Chromosome Location . Start  9766509
Chromosome Location . End  9774807 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E11.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E11.1a R10E11.1a 6021   III: 9766698-9766737

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E11.1a.2 9766509 9774807 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101516   229   III: 9766509-9766737 Caenorhabditis elegans
Exon101521   77   III: 9766791-9766867 Caenorhabditis elegans
Exon101525   789   III: 9766920-9767708 Caenorhabditis elegans
Exon101529   366   III: 9768003-9768368 Caenorhabditis elegans
Exon101533   127   III: 9768421-9768547 Caenorhabditis elegans
Exon101538   117   III: 9768713-9768829 Caenorhabditis elegans
Exon101541   513   III: 9768881-9769393 Caenorhabditis elegans
Exon101545   3213   III: 9769444-9772656 Caenorhabditis elegans
Exon101549   208   III: 9772708-9772915 Caenorhabditis elegans
Exon101553   193   III: 9772966-9773158 Caenorhabditis elegans
Exon101557   303   III: 9773331-9773633 Caenorhabditis elegans
Exon101560   271   III: 9773862-9774132 Caenorhabditis elegans
Exon101565   258   III: 9774550-9774807 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E11.1a.2 9766509 9774807 1

1 Sequence

Length
6664

1 Sequence Ontology Term

Identifier Name Description
transcript