WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10E11.1c.1 Sequence Name  R10E11.1c.1
Length (nt)  7005   Chromosome Location  III: 9766516-9774825
Chromosome . Primary Identifier  III Chromosome Location . Start  9766516
Chromosome Location . End  9774825 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10E11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10E11.1c R10E11.1c 5934   III: 9766698-9766737

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10E11.1c.1 9766516 9774825 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon101519   222   III: 9766516-9766737 Caenorhabditis elegans
Exon101523   77   III: 9766791-9766867 Caenorhabditis elegans
Exon101527   789   III: 9766920-9767708 Caenorhabditis elegans
Exon101531   366   III: 9768003-9768368 Caenorhabditis elegans
Exon101535   127   III: 9768421-9768547 Caenorhabditis elegans
Exon101539   117   III: 9768713-9768829 Caenorhabditis elegans
Exon101543   513   III: 9768881-9769393 Caenorhabditis elegans
Exon101547   3213   III: 9769444-9772656 Caenorhabditis elegans
Exon101551   208   III: 9772708-9772915 Caenorhabditis elegans
Exon101555   193   III: 9772966-9773158 Caenorhabditis elegans
Exon101559   216   III: 9773418-9773633 Caenorhabditis elegans
Exon101563   964   III: 9773862-9774825 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10E11.1c.1 9766516 9774825 1

1 Sequence

Length
7005

1 Sequence Ontology Term

Identifier Name Description
transcript