WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16G12.1.1 Sequence Name  T16G12.1.1
Length (nt)  5857   Chromosome Location  III: 10040181-10049857
Chromosome . Primary Identifier  III Chromosome Location . Start  10040181
Chromosome Location . End  10049857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16G12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011803 T16G12.1 T16G12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16G12.1 T16G12.1 5673   III: 10040251-10040499

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16G12.1.1 10040181 10049857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon102276   319   III: 10040181-10040499 Caenorhabditis elegans
Exon102277   115   III: 10040550-10040664 Caenorhabditis elegans
Exon102278   186   III: 10041191-10041376 Caenorhabditis elegans
Exon102279   135   III: 10041422-10041556 Caenorhabditis elegans
Exon102280   350   III: 10041612-10041961 Caenorhabditis elegans
Exon102281   95   III: 10042009-10042103 Caenorhabditis elegans
Exon102282   208   III: 10042152-10042359 Caenorhabditis elegans
Exon102283   249   III: 10042493-10042741 Caenorhabditis elegans
Exon102284   284   III: 10042792-10043075 Caenorhabditis elegans
Exon102285   193   III: 10043417-10043609 Caenorhabditis elegans
Exon102286   205   III: 10043661-10043865 Caenorhabditis elegans
Exon102287   420   III: 10043938-10044357 Caenorhabditis elegans
Exon102288   89   III: 10044402-10044490 Caenorhabditis elegans
Exon102289   162   III: 10044558-10044719 Caenorhabditis elegans
Exon102290   115   III: 10044772-10044886 Caenorhabditis elegans
Exon102291   324   III: 10044936-10045259 Caenorhabditis elegans
Exon102292   74   III: 10045308-10045381 Caenorhabditis elegans
Exon102293   181   III: 10045433-10045613 Caenorhabditis elegans
Exon102294   111   III: 10045660-10045770 Caenorhabditis elegans
Exon102295   374   III: 10046151-10046524 Caenorhabditis elegans
Exon102296   249   III: 10046575-10046823 Caenorhabditis elegans
Exon102297   183   III: 10047053-10047235 Caenorhabditis elegans
Exon102298   328   III: 10047287-10047614 Caenorhabditis elegans
Exon102299   80   III: 10047666-10047745 Caenorhabditis elegans
Exon102303   79   III: 10047816-10047894 Caenorhabditis elegans
Exon102304   163   III: 10048326-10048488 Caenorhabditis elegans
Exon102305   150   III: 10048538-10048687 Caenorhabditis elegans
Exon102306   116   III: 10048743-10048858 Caenorhabditis elegans
Exon102307   103   III: 10049235-10049337 Caenorhabditis elegans
Exon102308   217   III: 10049641-10049857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16G12.1.1 10040181 10049857 -1

1 Sequence

Length
5857

1 Sequence Ontology Term

Identifier Name Description
transcript