WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C4.2.2 Sequence Name  T07C4.2.2
Length (nt)  1181   Chromosome Location  III: 10347349-10349727
Chromosome . Primary Identifier  III Chromosome Location . Start  10347349
Chromosome Location . End  10349727 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006545 tbx-8 T07C4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C4.2 T07C4.2 948   III: 10347584-10347879

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.2.2 10347349 10349727 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103030   98   III: 10347349-10347446 Caenorhabditis elegans
Exon103031   305   III: 10347575-10347879 Caenorhabditis elegans
Exon103034   76   III: 10348262-10348337 Caenorhabditis elegans
Exon103036   153   III: 10348393-10348545 Caenorhabditis elegans
Exon103037   549   III: 10349179-10349727 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C4.2.2 10347349 10349727 1

1 Sequence

Length
1181

1 Sequence Ontology Term

Identifier Name Description
transcript