WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07C4.2 Sequence Name  T07C4.2
Length (nt)  948   Chromosome Location  III: 10347584-10347879
Chromosome . Primary Identifier  III Chromosome Location . Start  10347584
Chromosome Location . End  10347879
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36891 TBX-8 35.9 315 Caenorhabditis elegans
 

Other

40 RNAi

WormBase ID
WBRNAi00063135
WBRNAi00063138
WBRNAi00063252
WBRNAi00018344
WBRNAi00006118
WBRNAi00063249
WBRNAi00063139
WBRNAi00063245
WBRNAi00063246
WBRNAi00086263
WBRNAi00063141
WBRNAi00063142
WBRNAi00063250
WBRNAi00063251
WBRNAi00063247
WBRNAi00086361
WBRNAi00086365
WBRNAi00069627
WBRNAi00069630
WBRNAi00069629
WBRNAi00069632
WBRNAi00069631
WBRNAi00069634
WBRNAi00069633
WBRNAi00069635
WBRNAi00069638
WBRNAi00069637
WBRNAi00069640
WBRNAi00069639
WBRNAi00069642

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07C4.2 10347584 10347879 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006545 tbx-8 T07C4.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07C4.2 10347584 10347879 1
CDS:T07C4.2 10348262 10348337 1
CDS:T07C4.2 10348393 10348545 1
CDS:T07C4.2 10349179 10349601 1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07C4.2.2 T07C4.2.2 1181   III: 10347349-10349727
Transcript:T07C4.2.1 T07C4.2.1 1096   III: 10347575-10349740