WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07C4.4 Sequence Name  T07C4.4
Length (nt)  327   Chromosome Location  III: 10355142-10355336
Chromosome . Primary Identifier  III Chromosome Location . Start  10355142
Chromosome Location . End  10355336
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C4.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35363 SPP-1 12.0 108 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00052726
WBRNAi00099891
WBRNAi00100465
WBRNAi00018346
WBRNAi00006704
WBRNAi00035293
WBRNAi00100839
WBRNAi00099689
WBRNAi00099285
WBRNAi00099487
WBRNAi00063172
WBRNAi00063173
WBRNAi00100091
WBRNAi00100278
WBRNAi00095339
WBRNAi00095341
WBRNAi00095343
WBRNAi00095345
WBRNAi00095347
WBRNAi00094541
WBRNAi00094550
WBRNAi00095377
WBRNAi00095380
WBRNAi00095399
WBRNAi00095409
WBRNAi00095418
WBRNAi00100652
WBRNAi00101026
WBRNAi00094560
WBRNAi00094563

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07C4.4 10355142 10355336 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004986 spp-1 T07C4.4 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07C4.4 10355142 10355336 -1
CDS:T07C4.4 10355386 10355517 -1

1 Sequence

Length
327

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07C4.4.1 T07C4.4.1 522   III: 10355098-10355668