WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C12.1f.1 Sequence Name  T21C12.1f.1
Length (nt)  1705   Chromosome Location  III: 10520762-10532705
Chromosome . Primary Identifier  III Chromosome Location . Start  10520762
Chromosome Location . End  10532705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C12.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006784 unc-49 T21C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C12.1f T21C12.1f 1347   III: 10520968-10521041

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1f.1 10520762 10532705 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon103440   280   III: 10520762-10521041 Caenorhabditis elegans
Exon103451   87   III: 10522047-10522133 Caenorhabditis elegans
Exon103459   76   III: 10522722-10522797 Caenorhabditis elegans
Exon103467   242   III: 10522916-10523157 Caenorhabditis elegans
Exon103475   83   III: 10524243-10524325 Caenorhabditis elegans
Exon103550   153   III: 10530586-10530738 Caenorhabditis elegans
Exon103556   104   III: 10531229-10531332 Caenorhabditis elegans
Exon103562   286   III: 10531379-10531664 Caenorhabditis elegans
Exon103569   131   III: 10532209-10532339 Caenorhabditis elegans
Exon103580   263   III: 10532443-10532705 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C12.1f.1 10520762 10532705 1

1 Sequence

Length
1705

1 Sequence Ontology Term

Identifier Name Description
transcript