WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A1B.2b Sequence Name  Y39A1B.2b
Length (nt)  2073   Chromosome Location  III: 10781881-10782146
Chromosome . Primary Identifier  III Chromosome Location . Start  10781881
Chromosome Location . End  10782146
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A1B.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44384 PTR-19, isoform b 78.3 690 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00056124
WBRNAi00076959
WBRNAi00076927
WBRNAi00020350
WBRNAi00006252
WBRNAi00036891

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A1B.2b 10781881 10782146 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004233 ptr-19 Y39A1B.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A1B.2b 10781881 10782146 1
CDS:Y39A1B.2b 10782367 10782478 1
CDS:Y39A1B.2b 10782887 10783008 1
CDS:Y39A1B.2b 10785639 10785719 1
CDS:Y39A1B.2b 10785904 10786016 1
CDS:Y39A1B.2b 10786061 10786164 1
CDS:Y39A1B.2b 10786215 10786300 1
CDS:Y39A1B.2b 10786656 10786739 1
CDS:Y39A1B.2b 10786789 10786907 1
CDS:Y39A1B.2b 10788022 10788491 1
CDS:Y39A1B.2b 10788991 10789457 1
CDS:Y39A1B.2b 10789522 10789570 1

1 Sequence

Length
2073

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A1B.2b.1 Y39A1B.2b.1 2175   III: 10781881-10789672