WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48A6B.8 Sequence Name  Y48A6B.8
Length (nt)  1656   Chromosome Location  III: 11027334-11027403
Chromosome . Primary Identifier  III Chromosome Location . Start  11027334
Chromosome Location . End  11027403
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6B.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19191 Y48A6B.8 62.6 551 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00047813
WBRNAi00047814
WBRNAi00047815
WBRNAi00047816
WBRNAi00015294
WBRNAi00021209
WBRNAi00022485
WBRNAi00006219
WBRNAi00006220
WBRNAi00037223

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48A6B.8 11027334 11027403 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012969 Y48A6B.8 Y48A6B.8 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48A6B.8 11027334 11027403 -1
CDS:Y48A6B.8 11027454 11027612 -1
CDS:Y48A6B.8 11027666 11027770 -1
CDS:Y48A6B.8 11027826 11027898 -1
CDS:Y48A6B.8 11027950 11028061 -1
CDS:Y48A6B.8 11028106 11028357 -1
CDS:Y48A6B.8 11028402 11028515 -1
CDS:Y48A6B.8 11028569 11028669 -1
CDS:Y48A6B.8 11028722 11029361 -1
CDS:Y48A6B.8 11029408 11029437 -1

1 Sequence

Length
1656

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48A6B.8.1 Y48A6B.8.1 1748   III: 11027242-11029437