WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48A6C.3.1 Sequence Name  Y48A6C.3.1
Length (nt)  2507   Chromosome Location  III: 11115754-11119226
Chromosome . Primary Identifier  III Chromosome Location . Start  11115754
Chromosome Location . End  11119226 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6C.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012976 sup-35 Y48A6C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48A6C.3 Y48A6C.3 999   III: 11117235-11117837

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6C.3.1 11115754 11119226 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon105067   2084   III: 11115754-11117837 Caenorhabditis elegans
Exon105070   69   III: 11117889-11117957 Caenorhabditis elegans
Exon105072   118   III: 11118786-11118903 Caenorhabditis elegans
Exon105073   150   III: 11118947-11119096 Caenorhabditis elegans
Exon105074   86   III: 11119141-11119226 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48A6C.3.1 11115754 11119226 -1

1 Sequence

Length
2507

1 Sequence Ontology Term

Identifier Name Description
transcript