WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48A6C.5b Sequence Name  Y48A6C.5b
Length (nt)  1362   Chromosome Location  III: 11131799-11131846
Chromosome . Primary Identifier  III Chromosome Location . Start  11131799
Chromosome Location . End  11131846
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48A6C.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34124 PHA-1, isoform b 53.0 453 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00114161
WBRNAi00114239
WBRNAi00114120
WBRNAi00056741
WBRNAi00056872
WBRNAi00056873
WBRNAi00072310
WBRNAi00068515
WBRNAi00068514
WBRNAi00064535
WBRNAi00073655
WBRNAi00073657
WBRNAi00073659
WBRNAi00068953
WBRNAi00068952
WBRNAi00068955
WBRNAi00068954
WBRNAi00063013
WBRNAi00020731
WBRNAi00006231
WBRNAi00063014
WBRNAi00063019
WBRNAi00063020
WBRNAi00030252
WBRNAi00063012
WBRNAi00114003
WBRNAi00114276
WBRNAi00073656
WBRNAi00073658
WBRNAi00114082

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48A6C.5b 11131799 11131846 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004010 pha-1 Y48A6C.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48A6C.5b 11131799 11131846 1
CDS:Y48A6C.5b 11132459 11132557 1
CDS:Y48A6C.5b 11132672 11132850 1
CDS:Y48A6C.5b 11132903 11133024 1
CDS:Y48A6C.5b 11133094 11133262 1
CDS:Y48A6C.5b 11135238 11135982 1

1 Sequence

Length
1362

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48A6C.5b.1 Y48A6C.5b.1 2092   III: 11131775-11136688