WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3A.11 Sequence Name  Y47D3A.11
Length (nt)  1860   Chromosome Location  III: 11218797-11218815
Chromosome . Primary Identifier  III Chromosome Location . Start  11218797
Chromosome Location . End  11218815
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44357 WHT-8 69.0 619 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00056729
WBRNAi00056730
WBRNAi00020696
WBRNAi00007090
WBRNAi00037153
WBRNAi00117955

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.11 11218797 11218815 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012925 wht-8 Y47D3A.11 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.11 11218797 11218815 1
CDS:Y47D3A.11 11219226 11219326 1
CDS:Y47D3A.11 11219378 11219515 1
CDS:Y47D3A.11 11219560 11219670 1
CDS:Y47D3A.11 11219953 11220112 1
CDS:Y47D3A.11 11220165 11220280 1
CDS:Y47D3A.11 11220337 11220426 1
CDS:Y47D3A.11 11220475 11220597 1
CDS:Y47D3A.11 11220679 11220866 1
CDS:Y47D3A.11 11220916 11221027 1
CDS:Y47D3A.11 11221351 11221677 1
CDS:Y47D3A.11 11222070 11222200 1
CDS:Y47D3A.11 11222423 11222666 1

1 Sequence

Length
1860

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3A.11.1 Y47D3A.11.1 1933   III: 11218791-11222733