WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3B.5b Sequence Name  Y47D3B.5b
Length (nt)  3411   Chromosome Location  III: 11410748-11410851
Chromosome . Primary Identifier  III Chromosome Location . Start  11410748
Chromosome Location . End  11410851
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3B.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19178 TWK-31, isoform b 127.6 1136 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00027524
WBRNAi00026723
WBRNAi00056772
WBRNAi00020704
WBRNAi00006166
WBRNAi00092953

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.5b 11410748 11410851 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006683 twk-31 Y47D3B.5 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3B.5b 11410748 11410851 1
CDS:Y47D3B.5b 11414324 11414504 1
CDS:Y47D3B.5b 11415365 11415475 1
CDS:Y47D3B.5b 11415532 11415659 1
CDS:Y47D3B.5b 11415819 11415911 1
CDS:Y47D3B.5b 11416640 11416818 1
CDS:Y47D3B.5b 11416869 11417007 1
CDS:Y47D3B.5b 11417898 11418118 1
CDS:Y47D3B.5b 11418191 11418333 1
CDS:Y47D3B.5b 11418385 11418609 1
CDS:Y47D3B.5b 11419027 11419094 1
CDS:Y47D3B.5b 11419143 11419320 1
CDS:Y47D3B.5b 11419373 11419501 1
CDS:Y47D3B.5b 11419983 11420135 1
CDS:Y47D3B.5b 11420186 11420254 1
CDS:Y47D3B.5b 11420309 11420493 1
CDS:Y47D3B.5b 11420537 11420636 1
CDS:Y47D3B.5b 11421412 11421510 1
CDS:Y47D3B.5b 11421562 11422100 1
CDS:Y47D3B.5b 11422928 11423081 1
CDS:Y47D3B.5b 11423441 11423542 1
CDS:Y47D3B.5b 11424200 11424310 1

1 Sequence

Length
3411

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3B.5b.1 Y47D3B.5b.1 3832   III: 11410678-11424661