WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y56A3A.1a Sequence Name  Y56A3A.1a
Length (nt)  2106   Chromosome Location  III: 11831469-11831567
Chromosome . Primary Identifier  III Chromosome Location . Start  11831469
Chromosome Location . End  11831567
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y56A3A.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33892 NTL-3, isoform a 78.3 701 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00070456
WBRNAi00073694
WBRNAi00072763
WBRNAi00073691
WBRNAi00073689
WBRNAi00073688
WBRNAi00002664
WBRNAi00073690
WBRNAi00072765
WBRNAi00073693
WBRNAi00072764
WBRNAi00073692
WBRNAi00073695
WBRNAi00002704
WBRNAi00029070
WBRNAi00117622
WBRNAi00117621
WBRNAi00117624
WBRNAi00057565
WBRNAi00117623
WBRNAi00057566
WBRNAi00117625
WBRNAi00070454
WBRNAi00070455

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.1a 11831469 11831567 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003826 ntl-3 Y56A3A.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y56A3A.1a 11831469 11831567 -1
CDS:Y56A3A.1a 11832171 11832380 -1
CDS:Y56A3A.1a 11833410 11833825 -1
CDS:Y56A3A.1a 11837964 11838120 -1
CDS:Y56A3A.1a 11841848 11842056 -1
CDS:Y56A3A.1a 11843116 11843551 -1
CDS:Y56A3A.1a 11844868 11845395 -1
CDS:Y56A3A.1a 11846411 11846461 -1

1 Sequence

Length
2106

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y56A3A.1a.1 Y56A3A.1a.1 2567   III: 11831012-11846465