WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49E10.14a Sequence Name  Y49E10.14a
Length (nt)  1008   Chromosome Location  III: 12426893-12427177
Chromosome . Primary Identifier  III Chromosome Location . Start  12426893
Chromosome Location . End  12427177
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.14a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28134 PIE-1, isoform a 38.3 335 Caenorhabditis elegans
 

Other

65 RNAi

WormBase ID
WBRNAi00095794
WBRNAi00082745
WBRNAi00082744
WBRNAi00106571
WBRNAi00009359
WBRNAi00067109
WBRNAi00067132
WBRNAi00067192
WBRNAi00067201
WBRNAi00067572
WBRNAi00115799
WBRNAi00057006
WBRNAi00087573
WBRNAi00006812
WBRNAi00007158
WBRNAi00077644
WBRNAi00101758
WBRNAi00101757
WBRNAi00087575
WBRNAi00087574
WBRNAi00079052
WBRNAi00026785
WBRNAi00084325
WBRNAi00077659
WBRNAi00101759
WBRNAi00101766
WBRNAi00101769
WBRNAi00057007
WBRNAi00101745
WBRNAi00079042

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.14a 12426893 12427177 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004027 pie-1 Y49E10.14 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.14a 12426893 12427177 1
CDS:Y49E10.14a 12427231 12427338 1
CDS:Y49E10.14a 12427382 12427507 1
CDS:Y49E10.14a 12428543 12428631 1
CDS:Y49E10.14a 12428688 12429087 1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49E10.14a.1 Y49E10.14a.1 1116   III: 12426893-12429195