WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099044 Phenotype Remark  There is a synergistic increase in the amount of extra gut cells with both pop-1(RNAi) and frk-1(RNAi).
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Method of delivery not explicit, authors say injection or soaking.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001487 frk-1 T04B2.2 Caenorhabditis elegans
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937
CDS:T04B2.2a T04B2.2a 1173   IV: 10044263-10044564

1 Laboratories

Primary Identifier
JR

1 Phenotype

Identifier Name Description
WBPhenotype:0001636 excess intestinal cells Animals contain an excess number of intestinal cells compared to control. In C. elegans, intestinal cells are derived from E-blastomere. The overproduction of intestinal tissues is a result of other blastomeres adopting an E-like fate or excess cell proliferation in the E lineage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037107

0 Strain