WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.8f Sequence Name  Y111B2A.8f
Length (nt)  2406   Chromosome Location  III: 12539004-12539285
Chromosome . Primary Identifier  III Chromosome Location . Start  12539004
Chromosome Location . End  12539285
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.8f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51949 AAKG-1, isoform f 87.2 801 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00001084
WBRNAi00007282
WBRNAi00055370
WBRNAi00055371
WBRNAi00055372
WBRNAi00055373
WBRNAi00055374
WBRNAi00055375
WBRNAi00019878
WBRNAi00019879
WBRNAi00036564
WBRNAi00036565

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.8f 12539004 12539285 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013732 aakg-1 Y111B2A.8 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.8f 12539004 12539285 -1
CDS:Y111B2A.8f 12540289 12540399 -1
CDS:Y111B2A.8f 12540677 12540952 -1
CDS:Y111B2A.8f 12542693 12542948 -1
CDS:Y111B2A.8f 12544619 12544841 -1
CDS:Y111B2A.8f 12547235 12547307 -1
CDS:Y111B2A.8f 12559999 12560250 -1
CDS:Y111B2A.8f 12561315 12561457 -1
CDS:Y111B2A.8f 12561805 12561879 -1
CDS:Y111B2A.8f 12572642 12572863 -1
CDS:Y111B2A.8f 12574633 12574824 -1
CDS:Y111B2A.8f 12574877 12574950 -1
CDS:Y111B2A.8f 12575091 12575160 -1
CDS:Y111B2A.8f 12575210 12575366 -1

1 Sequence

Length
2406

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.8f.1 Y111B2A.8f.1 2406   III: 12539004-12575366