WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.14a Sequence Name  Y111B2A.14a
Length (nt)  4251   Chromosome Location  III: 12626575-12626718
Chromosome . Primary Identifier  III Chromosome Location . Start  12626575
Chromosome Location . End  12626718
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.14a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44134 PQN-80, isoform a 160.3 1416 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00009284
WBRNAi00007291
WBRNAi00055343
WBRNAi00055344
WBRNAi00085523
WBRNAi00036570
WBRNAi00026588
WBRNAi00064389
WBRNAi00055342

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.14a 12626575 12626718 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.14a 12626575 12626718 1
CDS:Y111B2A.14a 12626764 12626844 1
CDS:Y111B2A.14a 12626911 12627018 1
CDS:Y111B2A.14a 12628701 12629306 1
CDS:Y111B2A.14a 12630373 12630678 1
CDS:Y111B2A.14a 12631927 12632207 1
CDS:Y111B2A.14a 12634857 12634929 1
CDS:Y111B2A.14a 12635548 12635753 1
CDS:Y111B2A.14a 12635810 12635860 1
CDS:Y111B2A.14a 12637489 12637808 1
CDS:Y111B2A.14a 12638881 12639086 1
CDS:Y111B2A.14a 12639647 12639685 1
CDS:Y111B2A.14a 12641050 12641166 1
CDS:Y111B2A.14a 12641820 12642314 1
CDS:Y111B2A.14a 12644471 12644596 1
CDS:Y111B2A.14a 12645025 12645310 1
CDS:Y111B2A.14a 12645682 12645954 1
CDS:Y111B2A.14a 12649659 12649849 1
CDS:Y111B2A.14a 12650000 12650142 1
CDS:Y111B2A.14a 12650194 12650328 1
CDS:Y111B2A.14a 12651168 12651231 1

1 Sequence

Length
4251

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.14a.3 Y111B2A.14a.3 4407   III: 12626568-12651692
Transcript:Y111B2A.14a.1 Y111B2A.14a.1 4788   III: 12626568-12651761
Transcript:Y111B2A.14a.2 Y111B2A.14a.2 4516   III: 12626568-12651757