WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.14s Sequence Name  Y111B2A.14s
Length (nt)  2448   Chromosome Location  III: 12626575-12626718
Chromosome . Primary Identifier  III Chromosome Location . Start  12626575
Chromosome Location . End  12626718
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.14s

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53608 PQN-80, isoform s 90.7 815 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00055343
WBRNAi00085523
WBRNAi00036570
WBRNAi00064389
WBRNAi00055342

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.14s 12626575 12626718 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004161 pqn-80 Y111B2A.14 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.14s 12626575 12626718 1
CDS:Y111B2A.14s 12626764 12626844 1
CDS:Y111B2A.14s 12626911 12627018 1
CDS:Y111B2A.14s 12628701 12629306 1
CDS:Y111B2A.14s 12630373 12630678 1
CDS:Y111B2A.14s 12631927 12632207 1
CDS:Y111B2A.14s 12634857 12634929 1
CDS:Y111B2A.14s 12635548 12635753 1
CDS:Y111B2A.14s 12635801 12635860 1
CDS:Y111B2A.14s 12637489 12637808 1
CDS:Y111B2A.14s 12638881 12639143 1

1 Sequence

Length
2448

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.14s.1 Y111B2A.14s.1 3788   III: 12626568-12640476