WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39E4B.10a Sequence Name  Y39E4B.10a
Length (nt)  1476   Chromosome Location  III: 13143373-13143531
Chromosome . Primary Identifier  III Chromosome Location . Start  13143373
Chromosome Location . End  13143531
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54083 Y39E4B.10, isoform a 57.2 491 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056235
WBRNAi00007141
WBRNAi00036942

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.10a 13143373 13143531 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012719 Y39E4B.10 Y39E4B.10 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.10a 13143373 13143531 -1
CDS:Y39E4B.10a 13144623 13144997 -1
CDS:Y39E4B.10a 13146350 13146418 -1
CDS:Y39E4B.10a 13147298 13147575 -1
CDS:Y39E4B.10a 13150187 13150334 -1
CDS:Y39E4B.10a 13151587 13151773 -1
CDS:Y39E4B.10a 13152370 13152470 -1
CDS:Y39E4B.10a 13152523 13152676 -1
CDS:Y39E4B.10a 13152748 13152752 -1

1 Sequence

Length
1476

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39E4B.10a.1 Y39E4B.10a.1 2788   III: 13142167-13152858