WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.10d.1 Sequence Name  Y39E4B.10d.1
Length (nt)  459   Chromosome Location  III: 13143373-13144922
Chromosome . Primary Identifier  III Chromosome Location . Start  13143373
Chromosome Location . End  13144922 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012719 Y39E4B.10 Y39E4B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.10d Y39E4B.10d 459   III: 13143373-13143531

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.10d.1 13143373 13144922 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108488   159   III: 13143373-13143531 Caenorhabditis elegans
Exon108490   300   III: 13144623-13144922 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.10d.1 13143373 13144922 -1

1 Sequence

Length
459

1 Sequence Ontology Term

Identifier Name Description
transcript