WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06F12.2e.1 Sequence Name  W06F12.2e.1
Length (nt)  2001   Chromosome Location  III: 13726641-13731679
Chromosome . Primary Identifier  III Chromosome Location . Start  13726641
Chromosome Location . End  13731679 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06F12.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012306 W06F12.2 W06F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.2e W06F12.2e 1719   III: 13726825-13726848

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.2e.1 13726641 13731679 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109715   208   III: 13726641-13726848 Caenorhabditis elegans
Exon109719   670   III: 13726923-13727592 Caenorhabditis elegans
Exon109726   80   III: 13728743-13728822 Caenorhabditis elegans
Exon109730   80   III: 13728868-13728947 Caenorhabditis elegans
Exon109734   207   III: 13729024-13729230 Caenorhabditis elegans
Exon109738   39   III: 13729280-13729318 Caenorhabditis elegans
Exon109742   142   III: 13729365-13729506 Caenorhabditis elegans
Exon109746   236   III: 13729588-13729823 Caenorhabditis elegans
Exon109748   172   III: 13730072-13730243 Caenorhabditis elegans
Exon109753   167   III: 13731513-13731679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.2e.1 13726641 13731679 -1

1 Sequence

Length
2001

1 Sequence Ontology Term

Identifier Name Description
transcript