WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1AB.4c Sequence Name  Y38C1AB.4c
Length (nt)  4155   Chromosome Location  IV: 695-1065
Chromosome . Primary Identifier  IV Chromosome Location . Start  695
Chromosome Location . End  1065
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53490 FRM-5.2, isoform c 154.0 1384 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00055997
WBRNAi00055999
WBRNAi00056000
WBRNAi00114830
WBRNAi00010790
WBRNAi00018048
WBRNAi00020254
WBRNAi00020256
WBRNAi00036830

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AB.4c 695 1065 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021406 frm-5.2 Y38C1AB.4 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AB.4c 695 1065 1
CDS:Y38C1AB.4c 1285 1501 1
CDS:Y38C1AB.4c 1625 2227 1
CDS:Y38C1AB.4c 2698 2773 1
CDS:Y38C1AB.4c 4909 5045 1
CDS:Y38C1AB.4c 5146 5220 1
CDS:Y38C1AB.4c 5462 5784 1
CDS:Y38C1AB.4c 6259 6703 1
CDS:Y38C1AB.4c 6994 7035 1
CDS:Y38C1AB.4c 7312 7454 1
CDS:Y38C1AB.4c 7705 7856 1
CDS:Y38C1AB.4c 7951 8130 1
CDS:Y38C1AB.4c 8352 8548 1
CDS:Y38C1AB.4c 11268 11421 1
CDS:Y38C1AB.4c 12469 12797 1
CDS:Y38C1AB.4c 13185 13343 1
CDS:Y38C1AB.4c 13704 14034 1
CDS:Y38C1AB.4c 14706 14926 1

1 Sequence

Length
4155

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1AB.4c.1 Y38C1AB.4c.1 4698   IV: 641-15415