WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02D3.1b.1 Sequence Name  R02D3.1b.1
Length (nt)  3119   Chromosome Location  IV: 245143-251924
Chromosome . Primary Identifier  IV Chromosome Location . Start  245143
Chromosome Location . End  251924 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02D3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019819 aass-1 R02D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02D3.1b R02D3.1b 2859   IV: 245197-245300

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.1b.1 245143 251924 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110633   158   IV: 245143-245300 Caenorhabditis elegans
Exon110636   301   IV: 246249-246549 Caenorhabditis elegans
Exon110638   379   IV: 246601-246979 Caenorhabditis elegans
Exon110640   128   IV: 247026-247153 Caenorhabditis elegans
Exon110642   108   IV: 248584-248691 Caenorhabditis elegans
Exon110643   54   IV: 248768-248821 Caenorhabditis elegans
Exon110645   407   IV: 248926-249332 Caenorhabditis elegans
Exon110647   237   IV: 249903-250139 Caenorhabditis elegans
Exon110649   132   IV: 250375-250506 Caenorhabditis elegans
Exon110651   439   IV: 250555-250993 Caenorhabditis elegans
Exon110653   334   IV: 251041-251374 Caenorhabditis elegans
Exon110654   442   IV: 251483-251924 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.1b.1 245143 251924 1

1 Sequence

Length
3119

1 Sequence Ontology Term

Identifier Name Description
transcript